Eu estou tentando compilar um programa no Linux + openmpi usando um makefile, mas recebi este erro: Eu olhei as respostas para problemas semelhantes, mas ainda posso consertá-lo.
/usr/bin/ld: outseis.o: undefined reference to symbol 'trunc@@GLIBC_2.2.5'
/usr/lib/gcc/x86_64-linux-gnu/4.8/../../../x86_64-linux-gnu/libm.so: error adding symbols: DSO missing from command line
collect2: error: ld returned 1 exit status
make: *** [sofi2D] Error 1
O makefile está abaixo: Eu suspeito que tenha a ver com uma biblioteca perdida, mas não consigo encontrar como fazer isso.
# Makefile for SOFI2D
#--------------------------------------------------------
# edit here:
# source code for model generation
# model file for viscoelastic modeling L>0
MODEL_V = hh_visco.c
# model file for elastic modeling L=0
MODEL_E = hh_elastic.c
# model file for viscoelastic modeling (overnight built)
MODEL_BV = benchmod.c
# model file for elastic modeling L=0 (overnight built)
MODEL_BE = benchmod_el.c
EXEC= ../bin
EXEC= ../bin
# Compiler (LAM: CC=hcc, CRAY T3E: CC=cc)
# ON Linux cluster running LAM
#CC=hcc
#LFLAGS=-lm -lmpi
#CFLAGS=-Wall -O4
# ON Linux cluster running OpenMPI and ON MAC
CC=mpicc
LFLAGS=-lm -lmpi
CFLAGS=-Wall -O3
# On CRAY T3E
# CC=cc
# On SCHARnet system
#CC=mpicc
#LFLAGS=-lm
# On HLRN system
#CC=mpcc
#LFLAGS=-lm
# ALTIX
#CC=icc
#CFLAGS=-mp -O3 -ip0
#LFLAGS=-lmpi -lm
# after this line, no further editing should be necessary
# --------------------------------------------------------
.c.o:
$(CC) $(CFLAGS) -c $<
SNAPMERGE_SCR = \
snapmerge.c \
holbergcoeff.c\
json_parser.c\
merge.c \
read_par_json.c \
readdsk.c \
writedsk.c \
util.c
SOFI2D_SRC= \
$(MODEL_V) \
$(MODEL_E) \
abs_update.c \
absorb.c \
av_mue.c\
av_rho.c\
av_tau.c\
catseis.c\
check_fs.c\
checkfd.c \
comm_ini.c\
cpml_update.c \
exchange_par.c \
exchange_s_rsg.c \
exchange_s.c \
exchange_v.c \
sofi2D.c \
holbergcoeff.c\
info.c \
initproc.c \
json_parser.c\
matcopy.c \
matcopy_elastic.c \
merge.c \
mergemod.c \
note.c \
outseis.c \
outseis_glob.c \
operators_s.c \
operators_v.c \
PML_pro.c \
prepare_update_s.c \
prepare_update_s_4.c \
psource.c \
rd_sour.c \
read_checkpoint.c\
read_par_json.c \
readdsk.c \
readmod_visco.c \
readmod_elastic.c \
receiver.c \
save_checkpoint.c\
saveseis.c \
saveseis_glob.c \
seismo_ssg.c \
snap_ssg.c \
sources.c \
splitrec.c \
splitsrc.c \
subgrid_bounds.c \
surface.c \
surface_elastic.c \
update_s_elastic_abs.c \
update_s_elastic_abs_4.c \
update_s_elastic_interior.c \
update_s_elastic_interior_4.c \
update_s_elastic_PML.c \
update_s_elastic_PML_4.c \
update_s_visc_abs.c \
update_s_visc_interior.c \
update_s_visc_PML.c \
update_s_visc_abs_4.c \
update_s_visc_interior_4.c \
update_s_visc_PML_4.c \
update_v_abs.c \
update_v_abs_4.c \
update_v_interior.c \
update_v_interior_4.c \
update_v_PML.c \
update_v_PML_4.c \
util.c \
wavefield_update_s_el.c \
wavefield_update_s_el_4.c \
wavefield_update_s_visc.c \
wavefield_update_s_visc_4.c \
wavefield_update_v.c \
wavefield_update_v_4.c \
wavelet.c \
write_par.c \
writedsk.c \
writemod.c \
zero_elastic.c \
zero_elastic_4.c \
zero_visco_4.c \
zero_visc.c \
zero_PML_elastic.c \
zero_PML_visc.c
SOFI2D_BENCH_SRC= \
$(MODEL_BV) \
$(MODEL_BE) \
abs_update.c \
absorb.c \
av_mue.c\
av_rho.c\
av_tau.c\
catseis.c\
check_fs.c\
checkfd.c \
comm_ini.c\
cpml_update.c \
exchange_par.c \
exchange_s_rsg.c \
exchange_s.c \
exchange_v.c \
sofi2D.c \
holbergcoeff.c\
info.c \
initproc.c \
json_parser.c\
matcopy.c \
matcopy_elastic.c \
merge.c \
mergemod.c \
note.c \
outseis.c \
outseis_glob.c \
operators_s.c \
operators_v.c \
PML_pro.c \
prepare_update_s.c \
prepare_update_s_4.c \
psource.c \
rd_sour.c \
read_checkpoint.c\
read_par_json.c \
readdsk.c \
readmod_visco.c \
readmod_elastic.c \
receiver.c \
save_checkpoint.c\
saveseis.c \
saveseis_glob.c \
seismo_ssg.c \
snap_ssg.c \
sources.c \
splitrec.c \
splitsrc.c \
subgrid_bounds.c \
surface.c \
surface_elastic.c \
update_s_elastic_abs.c \
update_s_elastic_abs_4.c \
update_s_elastic_interior.c \
update_s_elastic_interior_4.c \
update_s_elastic_PML.c \
update_s_visc_abs.c \
update_s_visc_interior.c \
update_s_visc_PML.c \
update_s_elastic_PML_4.c \
update_s_visc_abs_4.c \
update_s_visc_interior_4.c \
update_s_visc_PML_4.c \
update_v_abs.c \
update_v_abs_4.c \
update_v_interior.c \
update_v_interior_4.c \
update_v_PML.c \
update_v_PML_4.c \
util.c \
wavefield_update_s_el.c \
wavefield_update_s_el_4.c \
wavefield_update_s_visc.c \
wavefield_update_s_visc_4.c \
wavefield_update_v.c \
wavefield_update_v_4.c \
wavelet.c \
write_par.c \
writedsk.c \
writemod.c \
zero_elastic.c \
zero_elastic_4.c \
zero_visco_4.c \
zero_visc.c \
zero_PML_elastic.c \
zero_PML_visc.c \
SNAPMERGE_OBJ = $(SNAPMERGE_SCR:%.c=%.o)
SOFI2D_OBJ = $(SOFI2D_SRC:%.c=%.o)
SOFI2D_BENCH_OBJ = $(SOFI2D_BENCH_SRC:%.c=%.o)
snapmerge: $(SNAPMERGE_OBJ)
$(CC) $(LFLAGS) $(SNAPMERGE_OBJ) -o ../bin/snapmerge
sofi2D: $(SOFI2D_OBJ)
$(CC) $(LFLAGS) $(SOFI2D_OBJ) -o $(EXEC)/sofi2D
sofi2D_bench: $(SOFI2D_BENCH_OBJ)
$(CC) $(LFLAGS) $(SOFI2D_BENCH_OBJ) -o $(EXEC)/sofi2D_bench
clean:
find . -name "*.o" -exec rm {} \;
find . -name "*.c%" -exec rm {} \;
find . -name "*.bck" -exec rm {} \;
all: clean sofi2D snapmerge